Vet Med - Czech, 2015, 60(5):268-273 | DOI: 10.17221/8179-VETMED
A simplified duplex real-time PCR incorporating TaqMan minor groove binder (MGB) probes and an exogenous internal positive control for the simultaneous detection of Mycoplasma gallisepticum and Mycoplasma synoviae culturesOriginal Paper
- 1 University of Veterinary and Animal Sciences, Sub-Campus, Jhang, Lahore, Pakistan
- 2 Faculty of Veterinary Science, University of Agriculture, Faisalabad, Pakistan
- 3 University of Connecticut, Storrs, CT, USA
- 4 Faculty of Veterinary Sciences, Bahauddin Zakariya University, Multan, Pakistan
Mycoplasma gallisepticum (MG) and Mycoplasma synoviae (MS) are the most pathogenic and economically important mycoplasma pathogens that infect chickens. The development of rapid and innovative molecular diagnostic techniques is of pivotal importance for their effective control. The aim of the present study was to develop a novel duplex TaqMan real-time PCR assay for the simultaneous detection of MG and MS. This duplex real-time PCR assay incorporates TaqMan (FAM/NED) labelled minor groove binder (MGB) probes that target the cytadhesin encoding surface protein (mgc2) gene and the haemagglutinin surface protein (vlhA) gene of MG and MS, respectively. The assay also contained a TaqMan exogenous internal positive control (Exo IPC), to avoid false negative results that might happen due to failure in DNA extraction/PCR inhibition. The TaqMan MGB probe-based duplex RT-PCR incorporating Exo IPC was then applied to DNA from culture isolates for the simultaneous detection of MG (mgc2 gene) and MS (vlhA gene). For duplex RT-PCR the sensitivity recorded was 10-3 CFU/ml and 10-2 CFU/ml for MG and MS template DNA, respectively. The specificity of the real-time PCR assay was 100% for MG- and MS-specific probes in detecting both single as well as double infections. In conclusion, the use of TaqMan MGB probes for the detection of mgc2 and vlhA genes confers extra specificity and the incorporation of Exo IPC simplifies the assay, allowing the detection of double infections with low-copy target DNAs.
Keywords: avian Mycoplasma spp.; duplex real-time PCR; MGB probe; mgc2 gene; vlhA gene; internal positive control
Published: May 31, 2015 Show citation
ACS | AIP | APA | ASA | Harvard | Chicago | Chicago Notes | IEEE | ISO690 | MLA | NLM | Turabian | Vancouver |
References
- Anonymous (2013): Factors Influencing Multiplex RealTime PCR Application notes, Multiplex Real-Time PCR. http://www3.appliedbiosystems.com/cms/groups/mcb_marketing/documents/generaldocuments/cms_076529.pdf (accessed on 02 July, 2014).
- Ehtisham-ul-Haque S (2010): Diagnostic and molecular epidemiological investigations of Mycoplasma gallisepticum and Mycoplasma synoviae in poultry. [PhD Thesis.] University of Agriculture, Faisalabad, Pakistan. http://prr.hec.gov.pk/Thesis/838S.pdf.
- Ehtisham-ul-Haque S, Rahman SU, Siddique M, Qureshi AS (2011): Involvement of Mycoplasma synoviae in respiratory distress cases of broilers. Pakistan Veterinary Journal 31, 117-119.
- Farkas T, Szekely E, Belak S, Kiss I (2009): Real-time PCRbased pathotyping of Newcastle disease virus by use of TaqMan minor groove binder probes. Journal of Clinical Microbiology 47, 2114-2123.
Go to original source...
Go to PubMed...
- Fraga AP, de Vargas T, Ikuta N, Fonseca ASK, Celmer AJ, Marques EK, Lunge VR (2013): A Multiplex real-time PCR for detection of Mycoplasma gallisepticum and Mycoplasma synoviae in clinical samples from Brazilian commercial poultry flocks. Brazilian Journal of Microbiology 44, 505-510.
Go to original source...
Go to PubMed...
- Garcia M, Ikuta N, Levisohn S, Kleven SH (2005): Evaluation and comparison of various PCR methods for detection of Mycoplasma gallisepticum infection in chickens. Avian Diseases 49, 125-132.
Go to original source...
Go to PubMed...
- Grodio JL, Dhondt KV, O'Connell PH, Schat KA (2008): Detection and quantification of Mycoplasma gallisepticum genome load in conjunctival samples of experimentally infected house finches (Carpodacus mexicanus) using real-time polymerase chain reaction. Avian Pathology 37, 385-391.
Go to original source...
Go to PubMed...
- Guo Y, Cheng, A, Wang M, Shen C, Jia R, Chen S, Zhang N (2009): Development of TaqMan® MGB fluorescent real-time PCR assay for the detection of anatid herpesvirus-1. Journal of Virology 6, 71.
Go to original source...
Go to PubMed...
- Hong Y, Garcia M, Leiting V, Bencina D, Dufour-Zavala L, Zavala G, Kleven SH (2004): Specific detection and typing of Mycoplasma synoviae strains in poultry with PCR and DNA sequence analysis targeting the hemagglutinin encoding gene vlhA. Avian Diseases 48, 606-616.
Go to original source...
Go to PubMed...
- Jarquin R, Schultz J, Hanning I, Ricke SC (2009): Development of a real-time polymerase chain reaction assay for the simultaneous detection of Mycoplasma gallisepticum and Mycoplasma synoviae under industry conditions. Avian Diseases 53, 73-77.
Go to original source...
Go to PubMed...
- Kawahara F, Taira K, Nagai S, Onaga H, Onuma M, Nunoya T (2008): Detection of five avian Eimeria species by species-specific real-time polymerase chain reaction assay. Avian Diseases 52, 652-656.
Go to original source...
Go to PubMed...
- Kleven SH (1998): Mycoplasmosis. In: Swayne DE, Glisson JR, Jackwood MW, Pearson JE, Reed WM (eds.): A Laboratory Manual for the Isolation and Identification of Avian Pathogens. 4th ed. American Association of Avian Pathologists, Kennett Square, (PA). 74-80
- Kutyavin IV, Afonina IA, Mills A, Gorn VV, Lukhtanov EA, Belousov ES, Singer MJ, Walburger DK, Lokhov SG, Gall AA, Dempcy R, Reed MW, Meyer RB Hedgpeth J (2000): 3'-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures. Nucleic Acids Research 28, 655-661.
Go to original source...
Go to PubMed...
- Long RB, Nord S, Olofsson S, Westin J, Anderson L, Lindh M (2008): Multiplex real-time PCR for detection of respiratory tract infections. Journal of Clinical Virology 41, 53-56.
Go to original source...
Go to PubMed...
- OIE (2008): OIE Quality Standard and Guidelines for Veterinary Laboratories: Infectious Diseases. Office Internationale des Epizooties, Paris, France.
- Raviv Z, Kleven SH (2009): The development of diagnostic real-time TaqMan PCRs for the four pathogenic avian mycoplasmas. Avian Diseases 53, 103-107.
Go to original source...
Go to PubMed...
- Sprygin AV, Andreychuk DB, Kolotilov AN, Volkov MS, Runina IA, Mudrak NS, Borisov AV, Irza VN, Drygin VV, Perevozchikova NA (2010): Development of a duplex realtime TaqMan PCR assay with an internal control for the detection of Mycoplasma gallisepticum and Mycoplasma synoviae in clinical samples from commercial and backyard poultry. Avian Pathology 39, 99-109.
Go to original source...
Go to PubMed...
- Wang H, Fadl AA, Khan MI (1997): Multiplex PCR for avian pathogenic mycoplasmas. Molecular and Cellular Probes 11, 211-216.
Go to original source...
Go to PubMed...
This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY NC 4.0), which permits non-comercial use, distribution, and reproduction in any medium, provided the original publication is properly cited. No use, distribution or reproduction is permitted which does not comply with these terms.